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Figure 9 | BMC Genomics

Figure 9

From: De novo prediction of cis-regulatory elements and modules through integrative analysis of a large number of ChIP datasets

Figure 9

Conservation analysis of the CRMs. A. Distribution of average phastCons scores of the predicted CRMs in NCRs and of the same number and length sequences randomly selected from NCRs. The vertical dashed lines indicate the PhastCons score cutoffs for highly conserved (≥0.98) and non-conserved (≤0.02) CRMs. B. Distribution of average phastCons scores of all putative CREs in a predicted CRMs in NCRs and of the same number and length sequences randomly selected from NCRs. C. Distribution of average phastCons scores of single predicted CREs in NCRs and of the same number and length sequences randomly selected from NCRs. D. Distribution of average phastCons scores of single predicted CREs in CDRs and of the same number and length sequences randomly selected from CDRs. E. Distribution of average phastCons scores of the non-redundant original binding peaks in NCRs and of the same number and length sequences randomly selected from NCRs. F. Distribution of average phastCons scores of single predicted CREs in the original binding peaks in NCRs and of the same number and length sequences randomly selected from the original binding peaks in NCRs.

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BMC Genomics

ISSN: 1471-2164

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