Table 3 Ten largest contigs in the sbs04 library (mictic females with resting eggs versus mixed stage population of clone 1B4) and the associated BLAST matches.
From: Discovering genes associated with dormancy in the monogonont rotifer Brachionus plicatilis
Signature clone | No of clones | % of library | Uniprot ID | Description | e value |
|---|---|---|---|---|---|
sbs04P0006D10 | 63 | 5.2 | Â | Highly repeated protein | Â |
sbs04P0012K23 | 44 | 3.6 | Â | No match | Â |
sbs04P0011N24 | 40 | 3.3 | Â | Highly repeated protein | Â |
sbs04P0012K21 | 30 | 2.5 | Q27ST7 | Putative oxidoreductase, Hartmannella veriformis (Amoeba) | 1.1 E-49 |
sbs04P0012B19 | 28 | 2.3 | Â | No match | Â |
sbs04P0012J17 | 28 | 2.3 | Q7YW83 | Ferritin, Pinctada fucata (Pearl oyster) | 7.1 E-25 |
sbs04P0011G20 | 27 | 2.2 | Â | Highly repeated protein | Â |
sbs04P0006P13 | 26 | 2.2 | Â | Highly repeated protein | Â |
sbs04P0011N19 | 24 | 2.0 | Q000T2 | Hsp26, Artemia urmiana (brine shrimp) | 3.6 E-7 |
sbs04P0011H09 | 22 | 1.8 | Â | No match | Â |
Total | 332 | 27.4 | Â | Â | Â |