Skip to main content

Table 6 Putative transcripts for members of the small heat shock family identified in the EST libraries.

From: Discovering genes associated with dormancy in the monogonont rotifer Brachionus plicatilis

Gene

Clone

Accession number/Best BLAST match

Organism

E-value

RE

FRE

sbs02

sbs04

bpa-shsp-1

sb104P0004B19

A6N9U9/Alpha crystallin

Ornithodoros parkeri Soft tick

7.0 E-13

8

5

0

0

bpa-shsp-2

sbs04P0011I16

Q000T2/Small heat shock protein

Trichinella pseudospiralis Nematode

6.0 E-7

0

0

3

13

bpa-shsp-3

sbs04P0012K07

Q000T3/Small heat shock protein

Trichinella spiralis Trichina worm

2.0 E-7

0

0

0

25

bpa-shsp-4

sbs04P0012F21

P02516/Heat shock protein 23

Drosophila melanogaster Fruit fly

6.0 E-7

0

0

0

12

bpa-shsp-5

sbs04P0012E13

P27777/16.9kDa class I heat shock protein (HSP11)

Oryza sativa subs. Japonica Rice

8.0 E-6

0

0

0

5

    

Total

8

5

3

55

  1. Signature clones are given for transcripts (consensus sequences) composed of contigs.