From: Characterization of the bovine type I IFN locus: rearrangements, expansions, and novel subfamilies
 | Sub-locus 1 | Sub-locus 2 |
---|---|---|
SINEs: | 15.29% | 15.68% |
   Alu/B1 | 0.00% | 0.00% |
   MIRs | 0.51% | 0.81% |
LINEs: | 17.74% | 11.23% |
   LINE1 | 10.33% | 2.20% |
   LINE2 | 0.44% | 0.29% |
   L3/CR1 | 0.04% | 0.00% |
   RTE | 6.93% | 8.73% |
LTR elements: | 4.01% | 2.75% |
   MaLRs | 0.89% | 0.98% |
   ERVL | 0.12% | 0.03% |
   ERV classI | 0.79% | 0.22% |
   ERV classII | 0.00% | 0.00% |
DNA elements: | 2.36% | 2.68% |
   MER1_type | 1.72% | 2.45% |
   MER2_type | 0.45% | 0.00% |
Unclassified: | 0.00% | 0.00% |
Total interspersed repeats: | 39.40% | 32.35% |
Small RNA: | 0.24% | 0.40% |