Table 2 CNE with conserved inter-species association to genes and gene clusters that currently have been mapped in rainbow trout (Om) as described in Additional file 12.
From: Comparative genomics and evolution of conserved noncoding elements (CNE) in rainbow trout
Gene | Acronym | Om a | CNE | Om |
|---|---|---|---|---|
Myogenic factor 6 | MYF6 | 7/15 | CNE1215–1216 | 7–24 |
Myogenic factor 5 | MYF5 | 7/15 | CNE1215–1216 | 7–24 |
Collagen alpha-1 chain precursor | COL1A1 (BX867838) | 16 | CNE116–118 | 3/16 |
Myocyte-specific enhancer factor 2A | MEF2A (CA374878) | 27/31 | CNE173–175 | 27 |
Protein tweety homolog 3 | TTYH3 (OMM1268) | 2/9 | CNE589–546/CNE590–591 | 2/9 |
Homeobox protein Hox-A cluster | HoxAa | 3/16 | CNE116–118 | 3/16 |
Homeobox protein Hox-C cluster | HoxCb | 12/26–29 | CNE523–524 | 12–29 |