Table 3 Transcripts regulated in atretic ovary relative to vitellogenic/mature ovary
Clone ID | GenBank accession | FCa | UniProtKB/TrEMBL entry | Swiss-Prot hit | BLAST E-valueb | Length (% identity) | Gene Symbol |
|---|---|---|---|---|---|---|---|
pgsP0015C05 | FF286365 | +5.13 | B6DUH2 | Apolipoprotein C-I [Hemibarbus mylodon] | 1E-08 | 64 (46%) | apoc1 |
pgsP0002L08 | FF282262 | +3.36 | Â | Unknown | Â | Â | Â |
pgsP0007K07 | FF283810 | +2.90 | A8D3J2 | Leukocyte cell-derived chemotaxin 2 [Lates calcarifer] | 3E-53 | 129 (77%) | lect2 |
pgsP0010O12 | FF284909 | +2.35 | Q28178 | Thrombospondin [Bos taurus] | 1E-27 | 76 (72%) | thbs |
pgsP0022K21 | FF288994 | +2.05 | B5X719 | Heme-binding protein 2 [Salmo salar] | 2E-32 | 85 (40%) | hebp2 |
pgsP0008C17 | FF283994 | +1.93 | Q5KSU5 | Apolipoprotein A-I [Takifugu rubripes] | 7E-53 | 197 (49%) | apoa1 |
pgsP0020M08 | FF288324 | +1.84 | A8HG28 | S100-like calcium binding protein [Epinephelus coioides] | 6E-38 | 101 (74%) | s 100 |
pgsP0005K16 | FF283180 | +1.62 | Q6TH14 | Enolase [Danio rerio] | 1E-91 | 190 (92%) | eno3 |
pgsP0019F17 | FF287823 | +1.62 | Â | Unknown | Â | Â | Â |
pgsP0013O20 | FF285955 | +1.49 | Â | Unknown | Â | Â | Â |
pgsP0012B12 | FF285326 | -4.01 | B6NTA9 | Hypothetical protein BRAFLDRAFT_128798 [Branchiostoma floridae] | 2E-14 | 107 (41%) | BRAFLDRAFT_128798 |
pgsP0017B15 | FF287055 | -2.35 | Q67EX5 | Alpha-2-macroglobulin [Sparus aurata] | 4E-81 | 221 (70%) | a 2m |
pgsP0025P21 | FF290169 | -2.08 | XP_001519899 | Similar to hCG2006161, partial [Ornithorhynchus anatinus] | 4E-04 | 54 (51%) | LOC100090881 |
pgsP0006E10 | FF283378 | -1.93 | Q66KL2 | C-terminal binding protein 1 [Xenopus tropicalis] | 1E-61 | 178 (78%) | ctbp1 |
pgsP0013I09 | FF285819 | -1.88 | Â | Unknown | Â | Â | Â |
pgsP0021L12 | FF288651 | -1.83 | Q4H447 | Elongation factor 1 alpha [Hyla japonica] | 0.64 | 16 (69%) | ef1a |
pgsP0002C23 | FF282126 | -1.74 | Q90YM8 | Cytoplasmic FMR1 interacting protein 1 homolog [D. rerio] | 9E-119 | 227 (91%) | cyfip1 |
pgsP0013H18 | FF285805 | -1.68 | XP_001340467.2 | wu:fb21f05 [D. rerio] | 2E-23 | 112 (50%) | wu:fb21f05 |
pgsP0024C11 | FF289508 | -1.68 | Â | Unknown | Â | Â | Â |
pgsP0007E08 | FF283689 | -1.58 | B0UY57 | Novel protein similar to vertebrate RAP1 interacting factor homolog [D. rerio] | 7E-38 | 112 (76%) | rif1 |
pgsP0009C03 | FF284311 | -1.58 | Â | Unknown | Â | Â | Â |
pgsP0013B03 | FF285662 | -1.58 | Â | Unknown | Â | Â | Â |
pgsP0014A17 | FF285991 | -1.56 | B5X408 | Elongation of very long chain fatty acids protein 1 [S. salar] | 1E-24 | 60 (60%) | elovl1b |
pgsP0002P23 | FF282343 | -1.56 | B5X202 | Zinc finger protein 576 [S. salar] | 1E-04 | 65 (41%) | znf576 |
pgsP0006D18 | FF283364 | -1.55 | B5X308 | Golgi membrane protein 1 [S. salar] | 2E-19 | 55 (60%) | golm1 |
pgsP0030G11 | FF291702 | -1.55 | Â | Unknown | Â | Â | Â |