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Figure 1 | BMC Genomics

Figure 1

From: Erratum to: A draft genome sequence and functional screen reveals the repertoire of type III secreted proteins of Pseudomonas syringae pathovar tabaci 11528

Figure 1

Comparison of the complement of Pta 11528 genes encoding candidate T3SS substrates with those of the three fully sequenced P. syringae genomes. In addition to validated hop genes, also are included are several genes for T3SS helper proteins (hrpA1, hrpA2, hrpZ1, hrpW1, hrpK1 and hopP1) and several former candidates that are probably not true hop genes (hopAH2, hopJ1, hopAJ2 and hopAN1) (the HopDB website, http://www.pseudomonas-syringae.org); these genes are indicated by parentheses. Those genes that are conserved in Pta 11528 are shown in boldface and underlined. Pta 11528 also contains three hop genes that do not have orthologues in the three sequenced genomes: hopAR1, hopF1 and hopW1. * No close homologue of avrPto1 was found in Pta 11528; however, there is a gene encoding a protein that shares 43% amino acid identity with AvrPto 1 from Pto DC3000. ** In the Pta 11528 genome hrpZ1 and hopR1 appear to be degenerate pseudogenes.

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BMC Genomics

ISSN: 1471-2164

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