Skip to main content

Table 2 Representatives of TRs shared between N. vectensis and other organisms.

From: Expansion of tandem repeats in sea anemone Nematostella vectensis proteome: A source for gene novelty?

 

TR copy

number (n)

UniProt ID

Length

# of seq

Polyubiquitin (TR-unit 76 aa)

   

   C. albicans*

3

Q5ADS0_CANAL

229

91

   A. thaliana

4

Q7GAQ5_ARATH

324

78

   S. paradoxus

5

A2RVC2_SACPA

389

73

   S. japonicum

6

Q5DGA0_SCHJA

457

22

   N. vectensis

7

A7SUP6_ NEMVE

533

21

   A. thaliana

8

Q39256_ARATH

631

10

   T. brucei

9

Q383T7_9TRYP

685

5

   C. briggsae

10

Q61L84_CAEBR

762

6

   L. major

11

Q4Q165_LEIMA

837

2

   B. mori

12

Q9XXZ6_BOMMO

913

1

   L. braziliensis

13

A4HPM0_LEIBR

992

2

   D. melanogaster

14

Q8MSM5_DROME

1067

2

   H. sapiens

17

Q59EM9_HUMAN

1309

1

Hs1-Cortactin (TR-unit 37 aa)

   

   S. japonicum

3

Q5C1Z2_SCHJA

177

1

   D. melanogaster

4

Q9VDF4_DROME

339

13

   T. nigroviridis

5

Q4S596_TETNG

537

3

   M musculus

6

Q8BNA5_MOUSE

509

12

   N. vectensis

7

A7RF47_NEMVE

534

11

Calx-beta (TR-unit 114 aa)

   

   T. nigroviridis

3

Q4T3S8_TETNG

1122

6

   M. prolifera

4

O16859_MICPR

825

7

   M. musculus

5

FREM2_MOUSE

3160

11

   N. vectensis

6

A7SVI8_NEMVE

742

4

   V. splendidus

11

A3URD5_VIBSP

1599

1

   M. sp. pe36

13

A6FHE3_9GAMM

2950

1

   M. prolifera

15

O16857_MICPR

2205

1

   N. vectensis

17

A7SI34_NEMVE

2271

1

   D. donghaensis

22

A2TVC1_9FLAO

2755

1

   N. vectensis

41

A7SVI9_NEMVE

4953

1

  1. Tandem repeat proteins shared with representative N. vectensis proteins (in bold face). For detailed examples, see Additional file 4.