BMC Genomics

Table 1 The amino acid identities of Xl-MMPs compared to their counterpart Xt-MMPs#.

From: Genome-wide identification of Xenopus matrix metalloproteinases: conservation and unique duplications in amphibians

Xenopus laevis		Xenopus tropicalis
Name	Amino Acids	Name	Amino Acids	Scaffold	Identity (%)
Xl-MMP1A	466	Xt-MMP1	466	119	87
Xl-MMP1B	466				87
Xl-MMP2	656	Xt-MMP2	655	458	94
Xl-MMP3	458	Xt-MMP3	497	119	84
Xl-MMP7A	252	Xt-MMP7	259	119	87
Xl-MMP7B	259				81
Xl-MMP9	671	Xt-MMP9	670	29	87
Xl-MMP9TH	683	Xt-MMP9TH	683	29	91
Xl-MMP11	477	Xt-MMP11	477	12	93
Xl-MMP13	469*	Xt-MMP13	472	119	93
Xl-MMP13A	472				93
Xl-MMP14A	575	Xt-MMP14	578	792	94
Xl-MMP14B	576				93
Xl-MMP15	262*	Xt-MMP15	648	6	97
Xl-MMP16	592	Xt-MMP16	607	452	94
Xl-MMP17	159*	Xt-MMP17	588	12	95
Xl-MMP18	467	Xt-MMP18	467	119	86
Xl-MMP19	123*	Xt-MMP19	476	101	95
Xl-MMP20	478	Xt-MMP20	458	119	89
Xl-MMP21	604	Xt-MMP21	604	32	92
Xl-MMP23	381	Xt-MMP23	335*	414	80
Xl-MMP24A	361*	Xt-MMP24	603	954	99
Xl-MMP24B	247*				97
Xl-MMP25	546	Xt-MMP25	545	1214	89
Xl-MMP26	258	Xt-MMP26	261	119	88
Xl-MMP28A	496	Xt-MMP28	499	72	92
Xl-MMP28B	497				91
Xl-MMP N1	562*	Xt-MMP N1	573	501	90
Xl-MMP N3	519*	Xt-MMP N3	627	508	91
		Xt-MMP N2	260	119	N/A
		Xt-MMP N4	455	119	N/A
		Xt-MMP N5	422	119	N/A
		Xt-MMP N6	364	132	N/A

#Comparison of X. laevis and X. tropicalis MMPs. Pair-wise comparisons were done to obtain the percent of identities between the MMPs from the two species (*: incomplete sequences).

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ISSN: 1471-2164

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