Table 5 Genes that are among the 200 most variable in at least four tissues
From: Impact of breed and sex on porcine endocrine transcriptome: a bayesian biometrical analysis
Name | Symbol * | GO Biological process | zLW | zDU | zYL | zIB | zSEX |
|---|---|---|---|---|---|---|---|
Lysosomal trafficking regulator | LYST | Cellular defense | 9.1 | 3.3 | 8.0 | -20.7 | 8.4 |
phosphatidylethanolamine N-methyltransferase | PEMT | Cell proliferation | 18.4 | -12.6 | 0.1 | -6.2 | 2.0 |
Small VCP/p97-interacting protein | Q8NHG7* | - | -10.5 | -8.7 | 0.7 | 18.7 | 0.7 |
forkhead box F1 | FOXF1 | Organ morphogenesis, lung and gut development | 5.2 | -7.3 | 12.1 | -9.9 | 1.3 |
Death inducer-obliterator 1 | DATF1* | Apoptosis | 12.6 | -4.3 | -3.8 | -4.6 | 0.4 |
Major histocompatibility complex class B | HLA-B* | Antigen processing | -4.2 | -4.6 | -2.4 | 11.1 | 4.0 |
Heterogeneous nuclear ribonucleoprotein H2 | HNRPH2 | RNA binding | 3.0 | 2.0 | -11.7 | 7.2 | 4.8 |
Vesicle trafficking protein homolog B | SEC22L1 | ER to Golgi transport | -1.6 | 6.7 | -9.7 | 4.3 | 2.0 |
Microtubule-associated protein 6 | MAP6 | Negative regulation of microtubule depolymerization | 4.7 | -6.5 | 11.3 | -9.3 | 8.9 |
Rho-associated, coiled-coil containing kinase 1 | ROCK1 | Actin cytoskeleton organization and biogenesis | -4.9 | -4.7 | 14.4 | -4.67 | -5.7 |
Family with sequence similarity 92, member A1 | FAM92A1 | - | -10.2 | 14.3 | 0.8 | -4.7 | 3.3 |
Frizzled homolog 4 (Drosophila) | FZD4 | Multicellular organism develop, wnt signaling pathway | -14.2 | 12.1 | 5.6 | -3.6 | 2.0 |
Opticin | OPTC | Protein binding | 2.0 | -0.9 | 3.0 | -4.0 | 3.1 |
Armadillo repeat containing, X-linked 1 | ARMCX1* | Development, maintenance of tissue integrity | -13.6 | 6.5 | 0.5 | 6.5 | 3.6 |
Lipopolysaccharide-induced TNF factor | LITAF | Apoptosis | -3.9 | 7.4 | -7.9 | 4.5 | 7.7 |
Vasoactive intestinal peptide receptor 2 | VIPR2 | Cell cell signaling/G-protein coupled receptor protein signaling | 4.1 | 4.7 | -15.5 | 6.8 | 1.9 |
Amyloid beta (A4) precursor-like protein 2 | APLP2 | G-protein coupled receptor protein signaling | -4.5 | -3.9 | 14.4 | -5.8 | 2.3 |
Tousled-like kinase 2 | TLK2* | Cell cycle/chromatin assembly | 12.6 | -4.3 | -3.5 | -4.9 | 2.9 |
Immunoglobulin heavy constant mu | IGHM* | Antigen binding | -1.2 | 2.2 | -0.9 | 0.1 | 4.3 |