Table 3 Overall performance of protein-DNA binding mode prediction
From: DNA-binding residues and binding mode prediction with binding-mechanism concerned models
Protein-DNA binding mode | # of protein chains | Sensitivity | Precision |
|---|---|---|---|
zipper-type | 146 | 100.00% | 80.22% |
helix-turn-helix (HTH) | 220 | 70.45% | 73.46% |
zinc-coordinating | 166 | 68.07% | 88.98% |
β-hairpin/ribbon | 38 | 34.21% | 52.00% |
others | 30 | 93.33% | 50.91% |