From: Transcriptomic changes arising during light-induced sporulation in Physarum polycephalum
Sequencing | Â |
---|---|
Total 454 reads | 405,363 |
Total sequencing output (Mb) | 61.9 |
Reads from the competent plasmodia library | 125,456 |
Reads from the light-induced plasmodia library | 99,632 |
contigs | Â |
Total contigs | 16,669 |
Contigs with hit counts | 13,169 |
Contigs with at least 5 hits in both libraries | 2,103 |
More abundant in the library from competent plasmodia | 3,947a |
More abundant in the library from light-induced plasmodia | 4,972b |
Downregulated, significant differential expression | 1,149 |
Upregulated, significant differential expression | 1,623 |
similarity search | Â |
Total contigs with blastx results (e-value < 1E-3) | 7,778 |
Contigs with blastx results and hit counts | 5,544 |
Contigs with blastx results and significant differential expression | 1,287 |
annotations | Â |
Total contigs with GO annotations | 3,304 |
Total contigs with KEGG orthologs | 2,716 |
Total contigs with InterPro results | 6,813 |
Contigs with GO annotations and hit counts | 2,459 |
Contigs with KEGG orthologs and hit counts | 1,904 |
Contigs with InterPro results and hit counts | 5,180 |