Sequencing, annotation, and comparative genome analysis of the gerbil-adapted Helicobacter pylori strain B8

BMC Genomics

Table 4 List of 12 singletons of strain B8, i.e. genes which completely occur outside of the uncovered regions and have neither an 80/80 blastp hit in the B128 proteome nor a complete match with at most 2% differences on the DNA level.

	gene	product	J99-ortho	26695-ortho
1	HPB8_138	periplasmic protein TonB
2	HPB8_277	hypothetical protein predicted by Glimmer/Critica
3	HPB8_399	conserved hypothetical protein		HP1105
4	HPB8_639	hypothetical protein predicted by Glimmer/Critica
5	HPB8_655	Hydrogenase expression/formation protein hypD2
6	HPB8_692	Plasminogen-binding protein pgbA
7	HPB8_888	ferrous iron transport protein B	jhp0627	HP0687
8	HPB8_922	conserved hypothetical protein	jhp0654	HP0716
9	HPB8_976	hypothetical protein predicted by Glimmer/Critica
10	HPB8_1447	conserved hypothetical protein		HP1187
11	HPB8_1483	methyl-accepting chemotaxis protein	jhp0075	HP0082
12	HPB8_1618	hypothetical protein predicted by Glimmer/Critica

The last two columns show the locus tags of all genes in strain J99 and strain 26695 which are ortholog to the given gene of strain B8.

ISSN: 1471-2164