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Table 1 File format information.

From: Classifying genes to the correct Gene Ontology Slim term in Saccharomyces cerevisiae using neighbouring genes with classification learning

Chromosome Number

Start

Stop

Strand

Neighbour number

Neighbour strand

Distance

Neighbour GO aspect

Neighbour GO Slim term

GO aspect

GO Slim term

ten

18536

16767

C

1

W

2697

C

plasma membrane

C

cellular component

ten

18536

16767

C

1

W

2697

C

plasma membrane

F

hydrolase activity

ten

18536

16767

C

1

W

2697

C

plasma membrane

P

biological process

ten

18536

16767

C

1

W

2697

F

transporter activity

C

cellular component

ten

18536

16767

C

1

W

2697

F

transporter activity

F

hydrolase activity

ten

18536

16767

C

1

W

2697

F

transporter activity

P

biological process

ten

18536

16767

C

1

W

2697

P

transport

C

cellular component

ten

18536

16767

C

1

W

2697

P

transport

F

hydrolase activity

ten

18536

16767

C

1

W

2697

P

transport

P

biological process

ten

18536

16767

C

2

W

2697

?

?

C

cellular component

ten

18536

16767

C

2

W

2697

?

?

F

hydrolase activity

ten

18536

16767

C

2

W

2697

?

?

P

biological process

  1. Shows the format of the data files that included neighbour's Gene Ontology information and gene's Gene Ontology information. The columns represent the different values that were separated by commas. "?" represent unknown values.
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BMC Genomics

ISSN: 1471-2164

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