The hidden duplication past of the plant pathogen Phytophthora and its consequences for infection

BMC Genomics

Table 1 2HOM and 3HOM block detection in Phytophthora and reference genomes.

Organism	No. of filtered blocks	No. of possible filtered blocks	Percentage of filtered blocks
2HOM block detection
P. infestans	253	11,661	2.17
P. sojae	207	10,816	1.91
P. ramorum	128	8,706	1.47
P. tricornutum	24	9,559	0.25
P. falciparum	18	4,945	0.36
S. cerevisiae	51	5,516	0.92
K. lactis	12	5,235	0.23
A. thaliana	651	18,805	3.46
H. sapiens	258	16,746	1.54
T. nigroviridis	531	15,094	3.52
C. elegans	155	16,224	0.96
D. melanogaster	6	12,262	0.05
A. gambiae	46	10,140	0.45
3HOM block detection
P. infestans	77	11,224	0.69
P. sojae	15	10,062	0.15
P. ramorum	12	8,206	0.15
P. tricornutum	2	9,525	0.02
P. falciparum	4	4,919	0.08 08
S. cerevisiae	8	5,516	0.15
K. lactis	5	5,233	0.10
A. thaliana	90	17,410	0.52
H. sapiens	28	15,868	0.18
T. nigroviridis	71	14,367	0.49
C. elegans	25	15,835	0.16
D. melanogaster	1	11,867	0.01
A. gambiae	2	9,898	0.02

ISSN: 1471-2164