LTR retroelements in the genome of Daphnia pulex

BMC Genomics

Table 2 LTR retroelements overlapping with transcriptionally active regions.¹

Family	Scaffold	Start	Element length (bp)	Total length of TARs (bp)	Expression level²	Similarity of LTRs (%)³
Dpul_B25	48	724286	3577	1557	3.84	97.4
Dpul_C7	836	2600	5916	1150	0.58	99.3
Dpul_C8	40	919844	5282	1757	4.13	98.4
Dpul_C8	118	81961	5289	2171	3.16	99.7
Dpul_C15	161	267301	4681	576	0.73	100.0
Dpul_C17	175	143408	5473	1453	4.78	92.5
Dpul_C28	260	73082	5837	1066	4.78	92.7
Dpul_C33	35	412714	4633	828	0.58	100.0
Dpul_C40	71	404089	4744	4041	5.37	99.5
Dpul_G7	169	162521	7344	888	3.95	99.2
Dpul_G31	22	74408	13211	536	3.61	99.1
Dpul_G31	49	697716	13403	947	2.97	100.0

ISSN: 1471-2164