Table 4 Differentially expressed (DE) genes in the expression profile of 'Fully Resistant' animals 72 hours post-inoculation
From: Gene expression profiling in the lungs of pigs with different susceptibilities to Glässer's disease
Genes grouped by function | Genbank human RefSeq ID | FR v C fold change | FR v S fold change |
|---|---|---|---|
More highly expressed in 'Fully Resistant' animals | |||
Extracellular matrix components | |||
Collagen, type I, alpha 1 ( COL1A1 ) | NM_000088 | +2.55 | +3.94 |
Periostin ( POSTN ) | NM_006475 | +1.84 | +3.16 |
Immunoglobulin | |||
Immunoglobulin alpha heavy chain constant region (IGHA) | NONE | +2.03 | +1.82 |
Retinoid-binding | |||
Cellular retinoic acid binding protein 2 (CRABP2) | NM_001878 | +1.97 | +2.23 |
Other | |||
Mortality factor 4 like 1 (MORF4L1) | NM_206839 | +1.75 | +2.64 |
Less highly expressed in 'Fully Resistant' animals | |||
Retinoid binding | |||
Apolipoprotein D ( APOD ) | NM_001647 | -2.04 | -4.59 |
Retinol binding protein 4 ( RBP4 ) | NM_006744 | -2.36 | -4.92 |
PPAR-γ regulators/regulated | |||
Thioredoxin interacting protein (TXNIP) | NM_006472 | -1.87 | -2.43 |
Nuclear protein 1 (NUPR1) | NM_012385 | -2.06 | -1.75 |
Pyruvate dehydrogenase kinase, isoenzyme 4 (PDK4) | NM_002612 | -2.33 | -1.89 |
Lipid mobilization and metabolism | |||
ATP-binding cassette, sub-family A, member 6 (ABCA6) | NM_172346 | -2.69 | -2.81 |
Other | |||
Ubiquitin-conjugating enzyme E2L 6 (UBE2L6) | NM_004223 | -1.78 | +2.63 |
Annexin A8 like 2 (ANXA8L2) | NM_001630 | -1.84 | -2.73 |
Pre-mRNA cleavage complex II protein (PCF2) | NM_015885 | -1.84 | -3.27 |
Proprotein convertase subtilisin/kexin type 6 (PCSK6) | NM_138319 | -1.85 | -2.91 |
Glutathione S-transferase M3 (GSTM3) | NM_000849 | -1.91 | -1.99 |
BTG family, member 2 (BTG2) | NM_006763 | -1.92 | -2.85 |
Calnexin (CANX) | NM_001746 | -2.30 | -2.03 |
Thymosin like 3 (TMSL3) | NM_183049 | -5.28 | -4.86 |
Porcine endogenous retrovirus type C (PERV-C) | NONE | -7.11 | -3.41 |