Comparison of information-theoretic to statistical methods for gene-gene interactions in the presence of genetic heterogeneity

Table 4 Penetrance tables for comparing KWII to the other four competing methods.

The overall disease prevalence is K_p = 0.037. Only pairwise penetrances for SNP directly involved in Interactions 1, 2, and 3 are shown. The penetrance values for Interaction 1 and Interaction 2 are from [16] whereas those for Interaction 3 are from [2].

ISSN: 1471-2164