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Table 5 Protein-encoding transposable elements in V. destructor

From: Genomic survey of the ectoparasitic mite Varroa destructor, a major pest of the honey bee Apis mellifera

Class

Family

Number identified

DNA

TcMar-Mariner

6511

DNA

TcMar-Tc1

357

DNA

hAT

58

DNA

TcMar-Fot1

27

DNA

MuDR

12

Helitron

Helitron

338

LINE

R1

981

LINE

L2

93

LINE

CR1

83

LINE

BovB

47

LINE

Jockey

28

LINE

L1

17

LTR

Gypsy

914

LTR

Pao

102

LTR

Copia

74

LTR

Gypsy-Cigr

31

  1. Transposable elements identified with the protein-level repeat masking mode of RepeatMasker [44]. Class abbreviations are DNA, type II DNA transposon; LINE, long interspersed nuclear element; LTR, long-terminal repeat retrotransposon. Family designations are those of RepBase [68].