Table 4 Differences in amino acid substitutions of detected haplotypes in the eIF(iso)4E gene.
From: EcoTILLING in Capsicum species: searching for new virus resistances
eIF(iso)4E protein | New allele Names | Published proteins | Position of amino acid changea | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Allele name | Cultivar | 15 | 16 | 20 | 24 | 27 | 56 | 63 | 90 | 109 | 115 | 119 | ||
eIF(iso)4E_C | pvr6 + | F/YY/YWb | P | P | A | V | P | K | V | A | V | A | T | |
eIF(iso)4E_A | pvr6 2 | - | - | T | - | - | - | - | - | - | - | - | ||
eIF(iso)4E_F | pvr6 6 | - | T | - | - | - | - | - | - | - | - | - | ||
eIF(iso)4E_D | pvr6 4 | - | - | - | - | - | - | - | T | - | - | - | ||
eIF(iso)4E_B | pvr6 3 | - | - | - | - | S | - | - | T | - | - | - | ||
eIF(iso)4E_K | pvr6 8 | T | - | - | E | - | N | - | - | - | P | - | ||
eIF(iso)4E_H | pvr6 7 | - | - | E | A | - | - | I | - | - | - | - | ||
eIF(iso)4E_Ihc | - | - | - | E | S | - | - | I | - | - | - | - | ||
eIF(iso)4E_G | pvr6 9 | - | - | E | A | - | - | - | - | - | - | - | ||
eIF(iso)4E_E | pvr6 5 | - | - | E | - | - | - | - | - | - | - | I | ||
eIF(iso)4E_Jhc | - | - | - | -/E | -/A | - | - | -/I | - | -/A | - | - | ||