Table 1 Zebrafish CYPs in families 5-51, with Chromosomal location (Zv8), Ensembl gene ID (Release 58), and exon count
Gene name | Ensembl 58 Gene ID | Ensembl 58 Transcript ID | Ensembl 58 Protein ID | Chromosome | Transcript Start (bp) | Transcript End (bp) | Strand | Exon | Ref |
|---|---|---|---|---|---|---|---|---|---|
CYP5A1 | ENSDARG00000002249 | ENSDART00000109497 | ENSDARP00000100741 | 18 | 12577084 | 12755668 | 1 | 13 | Â |
CYP7A1 | ENSDARG00000069018 | ENSDART00000100069 | ENSDARP00000090841 | 2 | 20390259 | 20392545 | -1 | 6 | Â |
CYP7C1 | ENSDARG00000008858 | ENSDART00000008268 | ENSDARP00000020000 | 2 | 41226478 | 41238852 | 1 | 5 | Â |
CYP7D1 | ENSDARG00000004051 | ENSDART00000012822 | ENSDARP00000007208 | 7 | 60786672 | 60803272 | -1 | 6 | Â |
CYP8A1 | ENSDARG00000060094 | ENSDART00000084334 | ENSDARP00000078769 | 6 | 50097042 | 50118485 | -1 | 10 | [26] |
CYP8B1 | ENSDARG00000053068 | ENSDART00000053012a | ENSDARP00000091773 | 2 | 2631931 | 2633902 | -1 | 1 | Â |
CYP8B2 | ENSDARG00000059008 | ENSDART00000053010a | listed as pseudogene | 2 | 2598906 | 26000260 | -1 | 1 | Â |
CYP8B3 | ENSDARG00000059000 | ENSDART00000012143 | listed as pseudogene | 2 | 2583060 | 2584972 | -1 | 1 | Â |
CYP11A1 | ENSDARG00000002347 | ENSDART00000024866 | ENSDARP00000025030 | 25 | 23348335 | 23363675 | 1 | 11 | [117] |
CYP11A2 | ENSDARG00000051860 | ENSDART00000073566 | ENSDARP00000068056 | 25 | 23325076 | 23339692 | 1 | 9 | Â |
CYP11C1 | ENSDARG00000042014 | ENSDART00000061572 | ENSDARP00000061571 | 16 | 51516891 | 51525686 | 1 | 10 | Â |
CYP17A1 | ENSDARG00000033566 | ENSDART00000043156 | ENSDARP00000043155 | 13 | 33337340 | 33347115 | 1 | 8 | [29] |
CYP17A2 | ENSDARG00000053966 | ENSDART00000076086 | ENSDARP00000070565 | 23 | 44130651 | 44138933 | 1 | 9 | [32] |
CYP19A1 | ENSDARG00000041348 | ENSDART00000060605 | ENSDARP00000060604 | 18 | 39131244 | 39146992 | -1 | 9 | [34] |
CYP19A2 | ENSDARG00000009852 | ENSDART00000025590 | ENSDARP00000014320 | 25 | 3756544 | 3767668 | 1 | 10 | [34] |
CYP20A1 | ENSDARG00000006040 | ENSDART00000019325 | ENSDARP00000003222 | 5 | 61726392 | 61743655 | -1 | 15 | Â |
CYP21A1 | ENSDARG00000037550 | ENSDART00000059833a | ENSDARP00000059832 | 16 | 15091143 | 15104788 | -1 | 12 | Â |
CYP24A1 | ENSDARG00000070420 | ENSDART00000103307b | ENSDARP00000094084 | Zv8_NA3215 | 47572 | 49579 | -1 | 12 | Â |
CYP26A1 | ENSDARG00000033999 | ENSDART00000041728 | ENSDARP00000041727 | 12 | 9329895 | 9333488 | -1 | 7 | [41] |
CYP26B1 | ENSDARG00000077121 | ENSDART00000110347 | ENSDARP00000101543 | 7 | 25393384 | 25417689 | 1 | 6 | [118] |
CYP26C1 d | ENSDARG00000056029 | ENSDART00000077809 | ENSDARP00000072275 | 17 | 17123846 | 17136305 | 1 | 7 | [119] |
CYP27A3 | ENSDARG00000057262 | ENSDART00000079879 | ENSDARP00000074330 | 9 | 22363398 | 22377078 | 1 | 10 | Â |
CYP27A4 | ENSDARG00000055159 | ENSDART00000077479c | ENSDARP00000071946 | 9 | 39232071 | 39242971 | 1 | 9 | Â |
CYP27A5 | ENSDARG00000055159 | ENSDART00000108860c | ENSDARP00000101333 | 9 | 39213139 | 39219475 | 1 | 9 | Â |
CYP27A6 | ENSDARG00000069186 | ENSDART00000100487 | ENSDARP00000091260 | 9 | 39205591 | 39211049 | 1 | 9 | Â |
CYP27A7 | ENSDARG00000033802 | ENSDART00000045588 | ENSDARP00000045587 | 9 | 39194558 | 39204706 | 1 | 9 | Â |
CYP27B1 | ENSDARG00000045015 | ENSDART00000066178 | ENSDARP00000066177 | 11 | 460256 | 466291 | -1 | 11 | Â |
CYP27C1 | ENSDARG00000058439 | ENSDART00000081309 | ENSDARP00000075752 | 6 | 10507141 | 10520886 | -1 | 9 | Â |
CYP39A1 | ENSDARG00000017982 | ENSDART00000005764 | ENSDARP00000016128 | 20 | 39084490 | 39112294 | -1 | 12 | Â |
CYP46A1 | ENSDARG00000012137 | ENSDART00000028039 | ENSDARP00000025234 | 20 | 4947206 | 4961574 | 1 | 15 | Â |
CYP46A2 | ENSDARG00000004262 | ENSDART00000057699 | ENSDARP00000057698 | 5 | 73217357 | 73226060 | -1 | 15 | Â |
CYP46A4 | ENSDARG00000039492 | ENSDART00000099258 | ENSDARP00000090030 | 5 | 73235710 | 73241459 | -1 | 15 | Â |
CYP46A5 | not in | Ensembl | Build 58e | Â | Â | Â | Â | Â | Â |
CYP51A1 | ENSDARG00000042641 | ENSDART00000062551 | ENSDARP00000062550 | 19 | 486980 | 505501 | 1 | 10 | [54] |