Table 3 Protein functional categories for significantly induced genes by HMF during the lag phase in Saccharomyces cerevisiae
MIPS ID | Functionary category | p-value | Entries |
|---|---|---|---|
01 Metabolism | |||
01.01.03.03.02 | Degradation of proline | 7.82E-04 | PUT2, PUT1* |
01.01.03.05.02 | Degradation of arginine | 3.94E-04 | PUT1, CAR1 |
01.02.03.01 | Sulfate assimilation | 3.54E-03 | MET3, MET14 |
14 Protein fate (folding, modification, destination) | |||
14.07.11 | Protein processing (proteolytic) | 4.05E-09 | PRE7, ATG8, RPT2, RPT3, PRE1, PUP3, RPN12, PRE3, PRE6, RPT4, PRE10 |
14.13 | Protein/peptide degradation | 3.97E-11 | PRE7, SHP1, ATG8, NPL4, RPT2, RPN4, RPT3, RPN9, PRE1, PUP3, DDI1, OTU1, RPN12, ECM29, YHR138c, PRE3, PRE6, RPT4, PRE10 |
16 Protein with binding function or cofactor requirement (structural or catalytic) | |||
16.19.03 | ATP binding | 1.52E-03 | RPT2, SNQ2, RPT3, PDR15, YOR1, PDR5, RPT4, PDR12 |
20 Cellular transport, transport facilities and transport routes | |||
20.01.27 | Drug/toxin transport | 4.70E-06 | SNQ2, YOR1, TPO1, PDR5, TPO4, PDR12 |
20.03.22 | Transport ATPases | 3.68E-04 | SNQ2, YOR1, RSB1, PDR5, PDR12 |
20.03.25 | ABC transporters | 1.44E-05 | SNQ2, PDR15, YOR1, PDR5, PDR12 |
32 Cell rescue, defense and virulence | |||
32.05.01.03 | Chemical agent resistance | 1.73E-05 | SNQ2, MAG1, YOR1, YAP1, PDR5 |