Sample | Total filtered reads | Unique | Multiple | % | Unmapped | % |
---|
 |  | total | % | genome | % | bridged | % |  |  |  |  |
---|
shoot_0 h | 35,026,580 | 27,570,633 | 78.7 | 25,691,385 | 73.3 | 1,879,248 | 5.4 | 3,918,724 | 11.2 | 3,528,570 | 10.1 |
root_0 h | 26,993,353 | 20,765,422 | 76.9 | 19,422,807 | 72.0 | 1,342,615 | 5.0 | 1,712,639 | 6.3 | 4,506,648 | 16.7 |
shoot_1 h | 32,535,506 | 25,523,252 | 78.4 | 23,824,180 | 73.2 | 1,699,072 | 5.2 | 3,555,750 | 10.9 | 3,448,393 | 10.6 |
root_1 h | 32,952,067 | 26,672,186 | 80.9 | 24,783,243 | 75.2 | 1,888,943 | 5.7 | 1,967,331 | 6.0 | 4,301,387 | 13.1 |
- RNAs were prepared from normal shoot (shoot_0 h), normal root (root_0 h), shoot with salinity stress (shoot_1 h), or root with salinity stress (root_1 h). Numbers of 36-bp reads and their percentages of the total number of filtered reads, obtained by the summing of four technical replicates (Total filtered reads), are shown, as are reads mapped to the rice genome (Unique-genome), reads mapped uniquely to a predicted exon-exon bridging sequence (Unique-bridged), the total number of reads mapped uniquely to the genome and to a predicted exon-exon bridging sequence (Unique-total), reads mapped to multiple loci of the rice genome (Multiple), and reads unable to be mapped to the rice genome (Unmapped).