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Table 6 Potential targets of ABF3

From: Transcriptome analysis reveals absence of unintended effects in drought-tolerant transgenic plants overexpressing the transcription factor ABF3

 

AGI

  

2 h

24 h

Probe Set ID

 

Annotation

ABREs1

Control

35S:ABF3

Control

35S:ABF3

Osmolyte biosynthesis

254806_at

At4g12430

Trehalose-6-phosphate phosphatase, putative

1

 

1.146

  

Protein degradation

262164_at

At1g78070

WD-40 repeat family protein

1

 

2.072

2.312

2.647

Signalling

261506_at

At1g71697

Choline kinase, putative (AtCK1)

1

1.519

1.181

 

2.909

Transcription

253259_at

At4g34410

AP2 domain-containing transcription factor, putative

2

 

3.865

5.126

4.940

259432_at

At1g01520

Myb family transcription factor

3

2.367

2.762

 

3.247

262098_at

At1g56170

Nuclear factor Y, subunit C2 (NF-YC2)

3

 

1.944

  

261892_at

At1g80840

WRKY family transcription factor (WRKY40)

2

 

3.762

4.724

5.138

Transporters

260543_at

At2g43330

Inositol transporter 1 (AtINT1)

1

 

1.118

  

251916_at

At3g53960

Proton-dependent oligopeptide transport (POT) family protein

2

 

1.278

 

1.548

Other

251904_at

At3g54130

Josephin family protein

1

 

1.043

 

1.311

265634_at

At2g25530

AFG1-like ATPase family protein

2

   

1.399

252557_at

At3g45960

Expansin family protein (EXPL3)

1

 

1.467

 

1.850

253217_at

At4g34970

Actin-depolymerizing factor, putative

1

 

-1.417

-2.589

-2.791

262126_at

At1g59620

Disease resistance protein (CC-NBS class), putative

2

 

1.235

  

247246_at

At5g64620

Invertase/pectin methylesterase inhibitor family protein

1

 

-1.125

  

246495_at

At5g16200

50S ribosomal protein-related

1

 

1.193

2.080

2.162

Unknown

261193_at

At1g32920

Expressed protein

1

 

1.541

1.793

2.457

260227_at

At1g74450

Expressed protein

3

 

1.755

1.840

2.170

253155_at

At4g35720

Expressed protein

3

 

2.671

 

2.010

261065_at

At1g07500

Expressed protein

2

 

1.201

  

256069_at

At1g13740

Expressed protein

5

 

2.090

  

260367_at

At1g69760

Expressed protein

1

 

-1.278

  

260005_at

At1g67920

Expressed protein

1

2.251

2.051

 

2.825

254356_at

At4g22190

Expressed protein

2

-1.118

-1.031

 

-1.423

  1. Values are log2 fold changes.
  2. 1Number of ABA-responsive elements (ABREs) in the promoter region as determined by Gómez-Porras et al. [62]
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BMC Genomics

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