Tracking chromosomal positions of oligomers - a case study with Illumina's BovineSNP50 beadchip

BMC Genomics

Table 3 Chromosomal positions of SNPs.

This study\Illumina	no position	position
no position	0	355
position	74	51,788

Shown are the numbers of 52,217 SNPs that were mapped to the same chromosome in this study and by Illumina without ("no position") and with ("position") chromosomal position, according to Illumina and this study. In 566 cases, SNP positions were identical, in 50,367 there was a shift of one base pair, in 526 there was a shift of two, and in 329 cases, there was a shift of three of more base pairs.

ISSN: 1471-2164