Figure 2
Comparison of entire and vestigial ICEs found in M. agalactiae strains PG2 and 5632. Schematics represent ICEs encountered in 5632 (A) and in PG2 type strain (B). Large arrows represent CDSs, with homologous CDSs labelled with the same color. CDS nomenclature indicated below arrows is based on the first ICE study in 5632 [16]. ICEA5632-I, -II, -III, -IV, -V extend from MAGa7100 to 6880, MAGa2980 to 3220, MAGa4850 to 5060, MAGa4050 to 4010, MAGa3690 to 3670, respectively. ICEAPG2 extend from MAG4060 to 3860. Red crosses indicate SNPs or indels in between ICEs from 5632. Insertion sequence elements (ISMag1) are represented by shaded boxes with transposase CDS in light blue. Pseudogenes are represented by hatched colours with dotted lines.