Table 1 Genes that are divergent or absent in the A. pleuropneumoniae 896-07 field strain after comparison with the genome of serotype 5b reference strain L20
R | Locus Tag | Gene | Description | Log2 ratio |
|---|---|---|---|---|
P | APL_0495 | APL_0495 | Putative DNA-methyltransferase | -1.135 |
P | APL_0496 | APL_0496 | Hypothetical protein | -2.324 |
P | APL_0499 | APL_0499 | Hypothetical protein | -1.166 |
P | APL_0500 | APL_0500 | Hypothetical protein | -1.071 |
P | APL_0501 | APL_0501 | Possible DNA methylase | -1.418 |
P | APL_0502 | APL_0502 | Hypothetical protein | -1.794 |
P | APL_0503 | rusA | Predicted Endodeoxyribonuclease RusA | -1.065 |
P | APL_0505 | APL_0505 | Putative endolysin | -1.306 |
P | APL_0509 | APL_0509 | Bacteriophage capsid protein | -1.825 |
P | APL_0518 | APL_0518 | Hypothetical protein | -3.227 |
P | APL_0520 | APL_0520 | Hypothetical protein | -1.101 |
P | APL_0522 | APL_0522 | Phage-related tail assembly protein K | -1.635 |
P | APL_0523 | APL_0523 | Putative phage tail assembly protein | -1.533 |
P | APL_0524 | APL_0524 | Predicted phage tail protein | -1.097 |
T | APL_0547 | tadF | Tight adherence protein F | -0.909 |
T | APL_0550 | tadC | Tight adherence protein C | -1.528 |
T | APL_0551 | tadB | Tight adherence protein B | -1.917 |
T | APL_0552 | tadA | Tight adherence protein A | -1.781 |
T | APL_0553 | tadZ | Flp operon protein D | -1.991 |
T | APL_0556 | rcpC | Flp operon protein C | -1.815 |
O | APL_0427 | adhA | NADP-specific glutamate dehydrogenase | 1.081 |
O | APL_0445 | ykgF | Putative electron transport protein | -1.144 |
O | APL_0560 | rhlB | ATP-dependent RNA helicase RhlB | -2.063 |
O | APL_0672 | APL_0672 | Hypothetical protein | 0.927 |
O | APL_1959 | adhI | Alcohol dehydrogenase 1 | 1.015 |
O | APL_2001 | APL_2001 | Hypothetical protein | -1.618 |
O | APL_2011 | aldA | Putative aldehyde dehydrogenase AldA | 1.813 |
O | APL_2038 | lolC | Lipoprotein-releasing system transmembrane protein LolC | -0.915 |