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Table 2 Comparison of M1-MCM subset motifs to UniPROBE data.

From: Identifying functional relationships within sets of co-expressed genes by combining upstream regulatory motif analysis and gene expression information

Gene set

SCOPE motifs

UniPROBE match

E-value

Motif coverage

M-G1 MCM

ttcchhwwddggaar

Mcm1

6.5E-05

100.0%

Cluster A

aawttyy

Sfp1

3.9E-04

100.0%

M-G1 MCM

cacgtgdg

Cbf1

1.3E-03

44.4%

Cluster B

 

Pho4

4.5E-03

 
 

acgtg

Cbf1

4.9E-05

77.8%

  

Rtg3

1.7E-03

 
  

Pho4

3.5E-03

 
  

Tye7

8.6E-03

 
 

cccnnnnngga

Mcm1

3.0E-03

77.8%

 

aaacannnnnnnnttgc

Fkh1

1.0E-03

44.4%

  

Fkh2

4.0E-03

 

M-G1 MCM

ttttnnnnnnnnnntaa

Sfp1

1.5E-03

39.1%

Cluster C

   Â