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Table 3 Comparison of Cullen et al. dataset motifs to UniPROBE data.

From: Identifying functional relationships within sets of co-expressed genes by combining upstream regulatory motif analysis and gene expression information

Gene set

SCOPE motifs

UniPROBE match

E-value

Motif coverage

Cullen et al.

cataca

Rap1

7.2E-04

61.5%

Cluster B

    

Cullen et al.

tttacannnnnnnnnnaca

Fkh1

1.2E-03

35.0%

Cluster C

cgcnnnnnnnatgt

Cup9

2.1E-03

35.0%

 

atgcatga

Phd1

6.8E-03

35.0%

Cullen et al.

tagnnnnnnnnnatata

Spt15

1.3E-03

91.3%

Cluster E

attcc

Lys14

1.6E-03

100.0%