Table 3 Distribution of EPIYA-motif containing proteins at genus and species levels (as of July 6th 2009)
From: Effector prediction in host-pathogen interaction based on a Markov model of a ubiquitous EPIYA motif
Groups | Number of genuses | Number of species | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
|  | total | With copies of motif≥1 (%) | With copies of motif≥2 (%) | total | With copies of motif≥1 (%) | With copies of motif≥2 (%) | ||||
Archaea | 109 | 49 | 44.95% | 19 | 17.43% | 330 | 90 | 27.27% | 28 | 8.48% |
Viruses | 623 | 221 | 35.47% | 18 | 2.89% | 6443 | 433 | 6.72% | 30 | 0.47% |
Bacteria | 1198 | 560 | 46.74% | 209 | 17.45% | 6291 | 1398 | 22.22% | 360 | 5.72% |
Eukaryota | 35499 | 1828 | 5.15% | 122 | 0.34% | 108654 | 2725 | 2.51% | 169 | 0.16% |
-Protista | 1263 | 109 | 8.63% | 18 | 1.43% | 3747 | 186 | 4.96% | 32 | 0.85% |
-Fungi | 1509 | 121 | 8.02% | 40 | 2.65% | 5772 | 206 | 3.57% | 52 | 0.90% |
-Metazoa | 22309 | 662 | 2.97% | 49 | 0.22% | 62097 | 826 | 1.33% | 68 | 0.11% |
-Viridiplantae | 10418 | 936 | 8.98% | 15 | 0.14% | 37038 | 1507 | 4.07% | 17 | 0.05% |
total | 37429 | 2658 | 7.10% | 368 | 0.98% | 121718 | 4646 | 3.82% | 587 | 0.48% |