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Table 2 Effect of changes in genes on the prediction performance.

From: Qualitative reasoning of dynamic gene regulatory interactions from gene expression data

#genes in a dataset

20

30

40

50

60

70

80

90

#certain regulations (a)

50

71

114

133

177

221

235

241

#possible regulations (b)

20

33

61

64

79

109

116

121

#total regulations (c)

91

137

227

265

332

426

453

470

Accuracy (%) ((a+b)/c)

76.9

75.9

77.1

74.3

77.1

77.5

77.5

77.0

  1. GeneNetFinder was tested on a different number of genes, which were selected randomly in each run from a pool of 90 yeast genes. The accuracy shown in the table is the average of 10 independent runs. Correct regulations include certain regulations and possible regulations.