| 454 pyrosequencing | Sanger sequencing^ | Illumina sequencing* | |||
---|---|---|---|---|---|---|
 | Progeny | Parents | Reference genome | |||
 | 7C126 | SC05 | Dd2 | HB3 | NP-3D7-S | NP-3D7-L |
Number of Scaffolds | 970 | 2,349 | 2,837 | 1,189 | NA | NA |
N50 Scaffold Size (kb) | 35.5 | 11.1 | 19.11 | 96.5 | NA | NA |
Number of Contigs | 9,452 | 9,597 | 4,511 | 2,971 | 26,920 | 22,839 |
N50 Contig Size (kb) | 3.3 | 3.3 | 11.61 | 20.62 | 1.5 | 1.6 |
Largest Contig (kb) | 36.7 | 34.4 | NA | NA | NA | NA |
Number of assembled bases (Mb) | 20.8 | 21.1 | 19.5 | 23.4 | 19.02 | 21.09 |
Average Coverage | 33× | 36× | 7.8× | 7.1× | 43× | 64× |