Composite transcriptome assembly of RNA-seq data in a sheep model for delayed bone healing

BMC Genomics

Table 5 Model-based gene set analysis

ID	Name	Marginal	Count
GO:0031012	extracellular matrix	0.984	81/299
GO:0006941	striated muscle contraction	0.913	24/54
GO:0043292	contractile fiber	0.847	45/113
GO:0006096	glycolysis	0.680	13/48
GO:0051384	response to glucocorticoid stimulus	0.635	20/79
GO:0008009	chemokine activity	0.583	9/33
GO:0006956	complement activation	0.502	14/34
GO:0042246	tissue regeneration	0.481	9/28

The 884 differentially expressed genes were analyzed as the study set in comparison to a total of 15,343 mapped ovine genes for which a human gene symbol was identified. The column 'marginal' indicates the marginal probability of a term being in the 'active' state, and the column 'count' shows the counts of genes in the study (x) and population (y) sets as x/y.

ISSN: 1471-2164