Table 1 Area under ROC curve (AUC, in %) for J48 algorithm, for different datasets and different values of the GO term occurrence threshold (t)
From: A data mining approach for classifying DNA repair genes into ageing-related or non-ageing-related
Dataset Id | PPI-related attributes | t = 3 (301 GO terms) | t = 7 (157 GO terms) | t = 11 (101 GO terms) |
|---|---|---|---|---|
D1 | none | 63.0 | 68.0 | 65.3 |
D2 | #partners | 66.1 | 63.3 | 59.6 |
D3 | #partners + 10 BPI attr's | 72.3 | 74.2 | 75.4 |
D4 | #partners + 20 BPI attr's | 80.0 | 73.5 | 74.6 |
D5 | #partners + 30 BPI attr's | 79.2 | 67.7 | 77.5 |