Table 4 Probes used for Taqman analysis of specific miRNA sequences
From: Song exposure regulates known and novel microRNAs in the zebra finch auditory forebrain
miRBase name | Company name | Sequence detected |
|---|---|---|
tgu-let-7a | let-7a | 5'-UGAGGUAGUAGGUUGUAUAGUU-3' |
tgu-let-7f | let-7f | 5'-UGAGGUAGUAGAUUGUAUAGUU-3' |
tgu-miR-124 | miR-124 | 5'-UAAGGCACGCGGUGAAUGCC-3' |
tgu-miR-9 | miR-9 | 5'-UCUUUGGUUAUCUAGCUGUAUGA-3' |
tgu-miR-129-5p | miR-129-5p | 5'-CUUUUUGCGGUCUGGGCUUGC-3' |
tgu-miR-129-3p | miR-129-3p | 5'-AAGCCCUUACCCCAAAAAGCAU-3' |
tgu-miR-29a | miR-29c | 5'-UAGCACCAUUUGAAAUCGGU-3' |
tgu-miR-92 | miR-92a | 5'-UAUUGCACUUGUCCCGGCCUGU-3' |
tgu-miR-25 | miR-25 | 5'-CAUUGCACUUGUCUCGGUCUGA-3' |
RNU6B | RNU6B | 5'-CGCAAGGAUGACACGCAAAUUCGUGAAGCGUUCCAUAUUUUU-3' |
tgu-miR-2954-5p | novel51F-5p | 5'-GCUGAGAGGGCUUGGGGAGAGGA-3' |
tgu-miR-2954-3p | novel51F-3p | 5'-CAUCCCCAUUCCACUCCUAGCA-3' (Northern validated) |
tgu-miR-2954R-5p | novel51R-5p | 5'-UGCUAGGAGUGGAAUGGGGAUG-3' |
tgu-miR-2954R-3p | novel51R-3p | 5'-UCCUCUCCCCAAGCCCUCUCAGC-3' |