Table 4 Summary of the assignment of GO domains to contigs
tissue | tissue specific contigs assigned with GO terms | number of GO terms | |||||
|---|---|---|---|---|---|---|---|
|  | number of contigs (number with τ ≥ 0.8) | mean τ | biological process | molecular function | cellular component | total GO terms | unique to that tissue (number with τ ≥ 0.8) |
brain | 517 (32) | 0.73 | 1,020 | 327 | 262 | 1,609 | 114 (7) |
heart | 141 (43) | 0.78 | 295 | 101 | 59 | 455 | 32 (18) |
kidney | 337 (18) | 0.72 | 451 | 139 | 119 | 709 | 58 (8) |
liver | 219 (22) | 0.75 | 260 | 114 | 56 | 430 | 49 (1) |
muscle | 265 (36) | 0.75 | 307 | 75 | 70 | 452 | 44 (5) |
pancreas | 223 (42) | 0.75 | 313 | 104 | 48 | 465 | 46 (24) |
skin | 433 (125) | 0.77 | 593 | 126 | 114 | 833 | 67 (11) |
testes | 647 (54) | 0.73 | 677 | 131 | 133 | 941 | 117 (10) |
sum | 2,782 (372) | 0.75 | 3,916 | 1,117 | 861 | 5,894 | 527 (84) |
all tissues | 5,906 | 0.29 | 4,550 | 1,189 | 1,049 | 6,788 | 1,654 |