De novo sequencing and characterization of floral transcriptome in two species of buckwheat (Fagopyrum)

BMC Genomics

Table 2 Summary of BLAST search and annotation

	Fagopyrum esculentum	Fagopyrum tataricum
Contigs
Number of contigs with BLAST match	19122	19072
Number of contigs with GO annotation	15115	14684
Number of contigs without BLAST matches	6313	6329
Number of contigs with predicted ORF/mean length of ORF, bp	25345/368 (30-1637) 25115 > 90	24984/390 (39-1983) 24743 > 90
Species provided most of all best BLAST hits	Vitis vinifera	Vitis vinifera
Singletons
Total number of singletons	56766	42899
Number of singletons with BLAST match	14260	14671
Number of singletons with GO annotation	10303	10448
Number of singletons without BLAST matches	42506	28228
Species provided most of all best BLAST hits	Vitis vinifera	Vitis vinifera

ISSN: 1471-2164