Table 1 Deep sequencing statistics of stem-derived small RNAs
From: Characterization of the small RNA component of the transcriptome from grain and sweet sorghum stems
Library | # raw sequences | # perfect matches | % | # singlets | % | # clusters | Non-redundant set | % |
|---|---|---|---|---|---|---|---|---|
Mix | 4,023,513 | 2,547,108 | 63 | 276,044 | 11 | 35,083 | 311,127 | 8 |
BTx623 | 2,115,266 | 1,348,361 | 64 | 169,063 | 12 | 20,056 | 189,119 | 9 |
Rio | 3,173,601 | 2,180,988 | 69 | 234,276 | 11 | 31,563 | 265,839 | 8 |
LB/EF F2s | 11,974,953 | 7,472,940 | 62 | 653,279 | 9 | 120,132 | 773,411 | 6 |
HB/LF F2s | 17,049,436 | 9,459,548 | 55 | 835,284 | 9 | 164,623 | 999,907 | 6 |
Total | 38,336,769 | 23,008,945 | 60 | 2,167,946 | 9 | 371,457 | 2,539,403 | 8 |