Table 1 Summary of individual and combined de novo assembly of the subspecies sequences generated from 454-pyrosequencing
Assembly | Â | Count | Average length | N50 (bp) | Total bases |
|---|---|---|---|---|---|
ssp. | Reads | 823,392 | 403.9 | Â | 332,578,737 |
tridentata | Singletons | 191,745 | 403.6 | Â | 77,391,754 |
| Â | Contigs | 20,357 | 716.0 | 869 | 14,587,705 |
ssp. | Reads | 702,001 | 333.1 | Â | 233,854,535 |
vaseyana | Singletons | 179,189 | 331.5 | Â | 59,402,844 |
| Â | Contigs | 20,250 | 624.0 | 797 | 12,641,189 |
ssp. | Reads | 1,525,393 | 371.3 | Â | 566,433,272 |
combined | Singletons | 275,866 | 370.2 | Â | 102,121,262 |
| Â | Contigs | 29,541 | 796.0 | 1,003 | 23,521,465 |