Comparative high-throughput transcriptome sequencing and development of SiESTa, the Silene EST annotation database

Table 5 Silene contigs with hits that are exclusive to the A. thaliana, V. vinifera, and P. trichocarpa proteomes

Library	# hits in At, Vv, Pt	# hits At	# hits Vv	# hits Pt
SlM	2886	74	78	220
SlF	9887	49	102	152
SlFf	2732	69	104	105
SdM	1758	32	77	391
SdF	3339	99	70	212
SmM	7418	66	107	187
SvH	8270	44	71	130
Ds	8885	64	93	120
Mean	5646	62	87	189

In the second column are numbers of contigs with hits occurring in all three species; the following columns give the numbers of contigs with hits exclusively to A. thaliana (At) (3^rd column) (these sequences do not have significant matches with either V. vinifera or P. trichocarpa), V. vinifera (Vv) (4^th column) and P. trichocarpa (Pt) (5^th column).

ISSN: 1471-2164