Trait, QTL number and QTL interaction | Chrom. | QTL peak position | 2-LOD confidence interval | Morphological and/or cloned genes within 2 LOD conf. interval | LOD | Additive effect | R2* | LOD threshold | MIM R2** | H2 |
---|---|---|---|---|---|---|---|---|---|---|
Final leaf number | Â | Â | Â | Â | Â | Â | 3.0 | 0.47 | 0.87 | |
1 | 1H | 158 | (154-158) | Â | 6.9 | -0.9 | 0.17 | Â | Â | Â |
2 | 4H | 118 | (117-120) | VRN-H2 | 4.6 | 0.7 | 0.10 | Â | Â | Â |
3 | 5H | 157 | (154-161) | VRN-H1 | 3.5 | -0.7 | 0.09 | Â | Â | Â |
4 | 7H | 29 | (26-36) | Â | 3.6 | 0.7 | 0.08 | Â | Â | Â |
Plant height | Â | Â | Â | Â | Â | Â | 3.1 | 0.82 | 0.94 | |
1 | 1H | 131 | (120-136) | Â | 7.1 | -6.7 | 0.06 | Â | Â | Â |
2 | 2H | 156 | (155-158) | ZEO1 | 32.1 | -22.8 | 0.67 | Â | Â | Â |
3 | 3H | 51 | (43-60) | Â | 6.1 | 6.3 | 0.05 | Â | Â | Â |
4 | 6H | 100 | (74-104) | Â | 6.0 | 5.7 | 0.05 | Â | Â | Â |
Spike number | Â | Â | Â | Â | Â | Â | 2.9 | 0.50 | 0.63 | |
1 | 2H | 99 | (95-102) | VRS1 | 13.3 | 3.5 | 0.38 | Â | Â | Â |
2 | 5H | 43 | Â | Â | 2.4 | -1.3 | 0.05 | Â | Â | Â |
3 | 6H | 80 | Â | Â | 2.7 | 1.3 | 0.06 | Â | Â | Â |
Spike length | Â | Â | Â | Â | Â | Â | 3.1 | 0.93 | 0.98 | |
1 | 1H | 158 | (152-158) | Â | 6.7 | -0.5 | 0.00 | Â | Â | Â |
2 | 2H | 156 | (155-159) | ZEO1 | 45.8 | -3.0 | 0.81 | Â | Â | Â |
3 | 3H | 20 | (13-23) | Â | 5.0 | -0.5 | 0.04 | Â | Â | Â |
4 | 5H | 138 | (137-144) | Â | 3.8 | -0.3 | 0.02 | Â | Â | Â |
5 | 6H | 95 | (93-100) | Â | 4.5 | 0.4 | 0.02 | Â | Â | Â |
1 Ă— 2 | Â | Â | Â | Â | Â | 0.5 | 0.05 | Â | Â | Â |
Floret number | Â | Â | Â | Â | Â | Â | 3.0 | 0.87 | 0.97 | |
1 | 1H | 156 | (150-158) | Â | 9.4 | -5.8 | 0.06 | Â | Â | Â |
2 | 2H | 99 | (97-101) | VRS1 | 40.3 | -21.6 | 0.79 | Â | Â | Â |
3 | 3H | 36 | Â | Â | 2.9 | -2.9 | 0.01 | Â | Â | Â |
4 | 4H | 120 | (112-127) | VRN-H2 | 3.6 | 3.3 | 0.02 | Â | Â | Â |
5 | 6H | 91 | (73-103) | Â | 4.6 | 3.7 | 0.02 | Â | Â | Â |
Grain number | Â | Â | Â | Â | Â | Â | 3.0 | 0.74 | 0.92 | |
1 | 1H | 151 | (142-156) | Â | 3.9 | -4.9 | 0.01 | Â | Â | Â |
2 | 2H | 99 | (99-101) | VRS1 | 20.1 | -12.3 | 0.46 | Â | Â | Â |
3 | 2H | 156 | (150-163) | ZEO1 | 10.4 | -7.3 | 0.18 | Â | Â | Â |
1 Ă— 2 | Â | Â | Â | Â | Â | 2.9 | 0.04 | Â | Â | Â |
2 Ă— 3 | Â | Â | Â | Â | Â | 3.4 | 0.05 | Â | Â | Â |
Hundred grain weight | Â | Â | Â | Â | Â | 2.9 | 0.66 | 0.78 | ||
1 | 2H | 99 | (97-101) | VRS1 | 19.9 | 0.5 | 0.53 | Â | Â | Â |
2 | 6H | 60 | (54-61) | Â | 3.5 | -0.1 | 0.04 | Â | Â | Â |
3 | 7H | 103 | (96-111) | Â | 4.2 | 0.2 | 0.05 | Â | Â | Â |
Grain yield | Â | Â | Â | Â | Â | 3.1 | 0.29 | 0.49 | ||
1 | 1H | 157 | (153-158) | Â | 4.4 | -2.9 | 0.11 | Â | Â | Â |
2 | 2H | 160 | (150-165) | ZEO1 | 8.1 | -4,1 | 0.23 | Â | Â | Â |