Table 1 T. cacao BAC library overview
From: A genetically anchored physical framework for Theobroma cacao cv. Matina 1-6
Library | Restriction enzyme | BAC vector | No. clones | Average insert size (kb) | Insert range (kb) | Genome coverage* | HICF fragments (avg) | Control clones | Successful fingerprints |
|---|---|---|---|---|---|---|---|---|---|
TC_Bba | HindIII | pIndigoBAC536 | 36864 | 145 | 90-185 | 10× | 120.2 | 768 | 31864 |
TC_BBb | EcoRI | pIndigoBAC536 | 36864 | 120 | 40-160 | 10× | 102.1 | 768 | 32218 |
TC_BBc | MboI | pIndigoBAC536 | 36864 | 140 | 80-180 | 10× | 120.4 | 768 | 31304 |