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Table 2 Distribution of the functional grouping of the assembled isogroups based on GO-slim annotation.

From: Effect of the down-regulation of the high Grain Protein Content (GPC) genes on the wheat transcriptome during monocarpic senescence

Accession

Ontology

Total

Up-regulateda

Down-regulateda

GO:0019538

protein metabolic process

5.1

13.9

5.1

GO:0009987

cellular process

7.2

12.4

7.2

GO:0006950

response to stress

13.9

10.2

12

GO:0006810

transport

3.4

8.0

4.3

GO:0009719

response to endogenous stimulus

7.9

8.0

8.5

GO:0009056

catabolic process

2.8

7.3

1.8

GO:0009607

response to biotic stimulus

4.1

5.1

5.5

GO:0007165

signal transduction

8.7

4.4

9.9

GO:0006464

protein modification process

10.6

3.6

8.3

GO:0006350

transcription

2

3.6

1.9

GO:0009628

response to abiotic stimulus cellular component organization

3.2

1.9

2.6

GO:0016043

and biogenesis

3.4

0.7

4.5

GO:0008152

metabolic process

2.8

0.7

1.8

GO:0009058

biosynthetic process

2.7

0.7

3

GO:0006412

translation

3.7

0.0

1.9

 

Others

18.5

19.5

21.7

  1. Values are % of the total number of GO-annotated isogroups.
  2. aSignificantly different between genotypes (P≤0.01 edgeR and DEseq).