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Table 1 General genome features and assembly statistics for each strain

From: Comparative genomic analysis of Streptococcus suis reveals significant genomic diversity among different serotypes

Sp.

SS12

D9

D12

ST1

Size (bp)

2,096,866

2,177,656

2,183,059

2,034,321

G+C %

41.2

41.0

41.3

41.4

CDSs

2091

2136

2124

2030

Coding %

88.4

88.3

88.1

87.7

Pseudogenes & Partial Genes

63

126

100

100

Avg. Gene Length (nt)

887

901

906

879

rRNA Locus

4

4

4

4

tRNA

59

54

56

58

IS Elements

27

27

27

23

Genome Islands

16

16

23

6

Coverage

1042x

843x

722x

1627x

Scaffold N50 (kb)

130.4

37.8

76.9

44.2

Scaffolds

26

81

53

94