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Table 3 SNPs and indels of non-edited and 5'-edited/minimally edited genes

From: The Trypanosoma cruzi Sylvio X10 strain maxicircle sequence: the third musketeer

 

SNPs

Amino acid alterations

Gene

Indels

SNPs

A+B

B+C

A+C

Unique

total

A+B

B+C

A+C

Unique

12S rRNA

18

125

44

37

33

11

-

    

9S rRNA

8

46

20

12

14

0

-

    

MURF5

17

40

14

12

14

0

27

8

8

4

7

Cyb

1

129

64

36

28

1

15

7

5

3

0

MURF1

10

168

77

47

40

4

29

19

2

7

1

ND1

0

130

43

32

54

1

31

13

10

6

2

COII

0

75

33

18

23

1

17

5

4

8

0

MURF2

20

144

64

35

39

6

-

    

COI

0

206

80

62

55

9

8

6

2

0

0

ND4*

2

181

80

44

52

5

38

21

6

8

3

ND5**

7

223

84

79

55

5

55

25

18

7

5

Total

83

1467

603

414

407

43

220

104

55

43

18

  1. *for region beyond Esmeraldo 5' deletion; translation includes correction of frameshift in Sylvio
  2. **through available Sylvio sequence, ~1600 of ~1770 nts; Esmeraldo translation corrected for frameshifts