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Table 5 Correlation coefficients (r2) between qPCR mRNA abundance and 454 gene expression

From: A de novo transcriptome of the Asian tiger mosquito, Aedes albopictus, to identify candidate transcripts for diapause preparation

normalization method

NDI

DI

RPKM

0.722

0.911

TMM

0.548

0.727

  1. Correlation coefficients are derived from linear regressions between qPCR mRNA abundance and both TMM and RPKM gene expression measures from 454 read counts for each gene verified by qPCR.
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BMC Genomics

ISSN: 1471-2164

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