From: Comparison of measures of marker informativeness for ancestry and admixture mapping
 |  | Number of SNPs |  | SNPs genotyped in both populationa | |||||
---|---|---|---|---|---|---|---|---|---|
Chr # | length | in each population | SNPs genotyped | and fulfilling the filtering criteriab | |||||
 | (Mb) | CEU | YRI | in both populationsa | Delta | FST | FIC | SIC | In |
1 | 246.6 | 111887 | 120349 | 103330 | 1663 | 1657 | 1653 | 1651 | 1654 |
2 | 242.7 | 113613 | 122377 | 106053 | 1742 | 1751 | 1742 | 1740 | 1749 |
3 | 199.3 | 94608 | 101070 | 88060 | 1464 | 1447 | 1448 | 1450 | 1450 |
4 | 191.2 | 85403 | 92052 | 79856 | 1390 | 1394 | 1387 | 1398 | 1392 |
5 | 180.6 | 87071 | 92350 | 81083 | 1310 | 1298 | 1314 | 1302 | 1304 |
6 | 170.7 | 91415 | 95108 | 84536 | 1241 | 1235 | 1239 | 1231 | 1236 |
7 | 158.7 | 75234 | 79231 | 69766 | 1139 | 1144 | 1152 | 1157 | 1148 |
8 | 146.2 | 74443 | 79368 | 69177 | 1053 | 1055 | 1053 | 1048 | 1054 |
9 | 140.2 | 63507 | 66437 | 58713 | 842 | 841 | 834 | 844 | 845 |
10 | 135.3 | 72846 | 76787 | 67388 | 979 | 988 | 980 | 980 | 988 |
11 | 134.3 | 69175 | 73942 | 64140 | 986 | 987 | 988 | 990 | 981 |
12 | 132.3 | 67486 | 70909 | 62018 | 988 | 981 | 973 | 972 | 977 |
13 | 96.2 | 51879 | 55392 | 48496 | 719 | 726 | 701 | 713 | 723 |
14 | 88.2 | 44570 | 47354 | 41434 | 646 | 646 | 650 | 648 | 650 |
15 | 82.0 | 40705 | 43837 | 37774 | 590 | 596 | 596 | 590 | 595 |
16 | 88.7 | 42738 | 46366 | 39616 | 568 | 559 | 554 | 555 | 557 |
17 | 78.6 | 36534 | 39075 | 33576 | 572 | 569 | 580 | 574 | 570 |
18 | 76.1 | 40153 | 43467 | 37669 | 562 | 568 | 564 | 561 | 572 |
19 | 63.6 | 25251 | 26798 | 23264 | 405 | 404 | 404 | 407 | 405 |
20 | 62.4 | 35252 | 37476 | 32870 | 447 | 447 | 446 | 448 | 443 |
21 | 37.1 | 19336 | 20556 | 18105 | 252 | 250 | 254 | 249 | 249 |
22 | 35.1 | 19617 | 20595 | 17817 | 249 | 253 | 253 | 252 | 249 |
Total | Â | 1362723 | 1450896 | 1264741 | 19807 | 19796 | 19765 | 19760 | 19791 |