Figure 1
From: Refinement of Bos taurus sequence assembly based on BAC-FISH experiments
Example of GenAlyzer analysis (INV_27_42.3). (a) GenAlyzer graphic output of pairwise comparisons between masked Btau (bottom line) and UMD (upper line) sequences of the chr27 subtelomeric region. The blue/green/red lines connect the matching regions. Line colors vary according to the length of the matching segment. The two orange arrows encompass the inverted region of about ~6 Mbp in size. The red/blue/green ovals indicate the map position of the BACs selected to perform FISH experiments in interphase nuclei, an example of which is shown in (b). The signal arrangement clearly supports the UMD.