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Table 3 Summary of assembly and BLAST analysis of CHO sequences

From: Genomic sequencing and analysis of a Chinese hamster ovary cell line using Illumina sequencing technology

 

Mouse

Rat

Total contigs

1,864,122

1,707,312

Contigs with BLAST hits

559,545

482,888

Average% similarity of BLAST hits

96.46%

96.39%

Contigs hit known genes

264,917

214,353

Total unique genes hit

17,883

19,481