Table 2 Top 15 most represented protein domains found in ES proteins using Interproscan
From: In silico secretome analysis approach for next generation sequencing transcriptomic data
InterPro description | InterPro code | Number of ES proteins (%) |
|---|---|---|
Protein Kinase like domain | IPR011009 | 126 (4.90) |
Protein kinase, catalytic domain | IPR000719 | 114 (4.43) |
Serine/threonine-protein kinase like domain | IPR017442 | 99 (3.85) |
Serine/threonine-protein kinase domain | IPR002290 | 64 (2.49) |
Serine/threonine-protein kinase active site | IPR008271 | 52 (2.02) |
WD40 repeat like domain | IPR011046 | 40 (1.55) |
WD40 repeat subgroup | IPR019781 | 39 (1.52) |
WD40/YVTN repeat like domain | IPR015943 | 39 (1.52) |
WD40 repeat | IPR001680 | 39 (1.52) |
WD40 repeat domain | IPR017986 | 38 (1.47) |
Tyrosine-protein kinase catalytic domain | IPR020635 | 37 (1.44) |
WD40 repeat 2 | IPR019782 | 37 (1.44) |
Helicase C | IPR001650 | 35 (1.36) |
NAD(P)-binding domain | IPR016040 | 29 (1.13) |
Immunoglobulin-like fold | IPR013783 | 28 (1.09) |